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Yuan Tang
Christian Clauss
shrinath-suresh
actions-user
Dario Strbenac
Community Health
Community Size
1,112
Authors
97
Active Authors
last 2 years
66
Multi-Pub Authors
2+ publications
3%
Top Author Share
top 10 authors
1,711
Contributors
18
Active Contributors
709
Core Contributors
191
Multi-Repo
2+ repos
5,891
Participants
Publications
Avg Authors/Pub7.3
International57 (35%)
Cross-Institutional129 (79.1%)
Network Density0.0355
Collaboration Bridges
L
Laurent GattoS
Sean DavisL
Levi WaldronB
Benjamin Haibe‐KainsJ
Joel S. ParkerDomain Connectors
S
Susan Holmes4 fields, 8 topicsB
Benjamin J. Callahan4 fields, 8 topicsP
Paul J. McMurdie4 fields, 6 topicsJ
Julio Sáez-Rodríguez3 fields, 11 topicsM
Mark D. Robinson3 fields, 10 topicsRepositories
Avg Contributors/Repo6.5
International Repos0
Cross-Institutional Repos0
Network Density0.0638
Collaboration Bridges
Yuan TangChristian Claussshrinath-sureshactions-userDario StrbenacDomain Connector Repos
hks5august/cpsm8 fields, 18 topics
seandavi/geoquery6 fields, 14 topics
rformassspectrometry/spectripy5 fields, 6 topics
benjjneb/dada24 fields, 6 topics
lieberinstitute/deconvobuddies3 fields, 5 topics
Publications
Author Concentration3%
Healthy (3+ authors)133/163 (82%)
Solo author10/163 (6%)
At-Risk Publications (3)
| Publication | Author | Year |
|---|---|---|
| Building Predictive Models in <i>R</i> Using the <b>caret</b> Package | Max Kühn | 2008 |
| KEGG: Kyoto Encyclopedia of Genes and Genomes | Minoru Kanehisa | 2000 |
| crmclean/Autotuner: Adding Zenodo | crmclean | 2019 |
Repositories
Portfolio Bus Factor:1
Healthy distribution156/3710 (4%)
Single maintainer207/3710 (6%)
At-Risk Repositories (249)
| Repository | Top % | Core | Active |
|---|---|---|---|
| jimduggan/aimsir17 | 100% | 1 | |
| phaverty/bigmemoryextras | 100% | 1 | |
| petrenkokate/cellmentor | 100% | 1 | |
| xyz1396/aerith | 100% | 1 | |
| bioconductor/biocazul | 100% | 1 |
Publications
Publication Trend→
Author Consistency0.98
Avg Years Active/Author1.1
Publications by Year
2019
12
2020
21
2021
7
2022
12
2023
16
2024
14
2025
20
2026
1
Repositories
Commits (52 weeks)557
Commits (12 weeks)132→
Avg Contributor Consistency0.64
Avg Active Weeks/Contributor11.2
Author Retention
| Year | Total | New | Ret. | Churn |
|---|---|---|---|---|
| 2021 | 46 | 46 | 0 | 158 |
| 2022 | 73 | 73 | 0 | 46 |
| 2023 | 98 | 98 | 0 | 73 |
| 2024 | 50 | 42 | 8 | 90 |
| 2025 | 91 | 89 | 2 | 48 |
| 2026 | 6 | 6 | 0 | 91 |
Overall Retention Rate0.8%
Contributor Retention
New Contributors (12mo)8
Retained11
Churned350
Retention Rate3.0%
Engagement
Citing Community
Citing Authors135,043
Citing Institutions13,418
Citing Topic Breadth
Domains4
Fields26
Subfields235
Topics2,663
Top Citing Fields
Biochemistry, Genetics and Molecular Biology17,618
Medicine10,008
Environmental Science5,602
Agricultural and Biological Sciences5,209
Immunology and Microbiology2,434
Computer Science1,979
Engineering1,440
Neuroscience1,310
Earth and Planetary Sciences1,044
Chemistry844
Top Citing Subfields
Molecular Biology14,279
Genetics3,733
Ecology3,358
Cancer Research2,873
Plant Science2,827
Immunology2,094
Pulmonary and Respiratory Medicine2,042
Oncology1,723
Epidemiology1,387
Physiology1,255
Repository Activity
Issues Opened8,491
Issues Closed5,669
PRs Opened5,022
PRs Reviewed0
Comments20,388
Helpful Reactions2,668
Avg 0.13 reactions/comment
5197 reporters0 reviewers114 triagers53 support
Champions
Most Prolific Authors
N
Niko Beerenwinkel
5 publications
J
Julio Sáez-Rodríguez
5 publications
M
Mark D. Robinson
4 publications
High-Impact Maintainers
Vishnu Banna
0 citations, 77,685 stars
Abdullah Rashwan
0 citations, 77,685 stars
markdaoust
0 citations, 77,685 stars
Longest Author Careers
M
Mark D. Robinson
18 years (2007-2024)
S
Sean Davis
18 years (2007-2024)
F
Florian Markowetz
14 years (2012-2025)
Longevity Leaders
andreasheger
14 years, 31% consistency
Chen Sun
6 years, 60% consistency
John Marshall
8 years, 34% consistency
Community Advocates
theHumanBorch
258 comments, 32 reactions
Jiaming Yuan
217 comments, 36 reactions
frederickhuanglin
193 comments, 43 reactions
Top People
Top Authors (1000)
| Author | Pubs ▼ | Institutions | Topics | Years |
|---|---|---|---|---|
N Niko Beerenwinkel | 5 | 4 | 8 | 2007-2019 |
J Julio Sáez-Rodríguez | 5 | 8 | 11 | 2015-2023 |
M Mark D. Robinson | 4 | 3 | 10 | 2007-2024 |
B Benjamin J. Callahan | 4 | 3 | 8 | 2016-2019 |
R Rafael A. Irizarry | 3 | 3 | 8 | 2010-2017 |
C Charles M. Perou | 3 | 1 | 8 | 2009-2020 |
Z Zuguang Gu | 3 | 4 | 5 | 2020-2022 |
P Petr V. Nazarov | 3 | 1 | 5 | 2019-2024 |
S Sayed‐Rzgar Hosseini | 3 | 6 | 5 | 2019-2025 |
S Susan Holmes | 3 | 1 | 8 | 2016-2018 |
F Florian Markowetz | 3 | 3 | 7 | 2012-2025 |
J Joel S. Parker | 3 | 2 | 7 | 2009-2020 |
L Leonardo Collado‐Torres | 3 | 3 | 7 | 2016-2025 |
L Louise A. Huuki-Myers | 2 | 5 | 5 | 2025-2025 |
M Marcel Ramos | 2 | 3 | 6 | 2023-2024 |
R Réka Tóth | 2 | 1 | 3 | 2023-2024 |
N Nils Eling | 2 | 2 | 3 | 2020-2024 |
M Maryna Chepeleva | 2 | 2 | 3 | 2023-2024 |
A Antônio Reverter | 2 | 2 | 5 | 2008-2010 |
F Frank E. Harrell | 2 | 0 | 0 | 2003-2009 |
Top Contributors (1000)
| Contributor | Repos | Commits ▼ | Status | Consistency |
|---|---|---|---|---|
 Nitesh Turaga | 302 | 3,346 | Core | 0.00 |
 Dan Tenenbaum | 155 | 3,334 | Core | 0.00 |
 jwokaty | 301 | 2,926 | Core | 0.00 |
 Enio Gjerga | 2 | 2,796 | Core | 0.00 |
 ltla | 36 | 2,368 | Core | 0.00 |
 link-ny | 88 | 2,018 | Core | 0.00 |
 catalyst-project | 1 | 1,946 | Core | 0.00 |
| Jiaming Yuan | 1 | 1,924 | Core | 0.00 |
 Pierrick Roger | 11 | 1,830 | Core | 0.00 |
 Tianqi Chen | 1 | 1,800 | Core | 0.00 |
 Hervé Pagès | 245 | 1,779 | Core | 0.00 |
 Joffrey F | 1 | 1,716 | Core | 0.00 |
 TensorFlower Gardener | 1 | 1,640 | Core | 0.00 |
| andreasheger | 1 | 1,357 | Core | 0.31 |
 Leland McInnes | 1 | 1,247 | Core | 0.00 |
 Vincent Nijs | 1 | 1,244 | Core | 0.00 |
 Lori (Shepherd) Kern | 114 | 1,231 | Core | 0.00 |
 Sean Corbett | 1 | 1,138 | Core | 0.00 |
 Martin Morgan | 31 | 1,090 | Core | 0.00 |
 Benjamin Jean-Marie Tremblay | 1 | 1,066 | Core | 0.00 |