fastq_qc_report

Active

declared in 1.1.0

FastQC-style deep quality-control report for a FASTQ file: per-base quality and content, GC and length distributions, sequence duplication levels, overrepresented sequences, and adapter content — each with a warn/fail verdict against FastQC's own published thresholds.

Parameters schema

{
  "type": "object",
  "required": [
    "input"
  ],
  "properties": {
    "input": {
      "type": "string",
      "description": "FASTQ text: records of an '@id' header, sequence, '+' separator and quality line (four lines each)."
    },
    "qualityOffset": {
      "enum": [
        33,
        64
      ],
      "type": "integer",
      "default": 33,
      "description": "FASTQ Phred ASCII offset (33 = Sanger/Illumina 1.8+, 64 = Illumina 1.3-1.7)."
    }
  },
  "additionalProperties": false
}

What this tool wraps· 0 endpoints

min confidence0.70 0.50

No endpoints wrapped at confidence ≥ 0.50.

Parent server

com.seqbench/workbench

1/7 registries

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