melting_temperature
ActiveTool of com.seqbench/workbench
declared in 1.1.0
Primer/oligo melting temperature: nearest-neighbour (SantaLucia 1998) plus Wallace and salt-adjusted estimates, with the length-appropriate recommendation and molecular weights.
Parameters schema
{
"type": "object",
"required": [
"sequence"
],
"properties": {
"mgMM": {
"type": "number",
"default": 1.5,
"description": "Divalent cation [Mg2+] (mM)."
},
"naMM": {
"type": "number",
"default": 50,
"description": "Monovalent cation [Na+]/[K+] (mM)."
},
"dntpMM": {
"type": "number",
"default": 0.2,
"description": "Total [dNTP] (mM), chelates Mg2+."
},
"oligoNM": {
"type": "number",
"default": 250,
"description": "Total strand concentration (nM)."
},
"sequence": {
"type": "string",
"description": "Nucleotide sequence (raw or FASTA; IUPAC accepted)."
},
"targetTm": {
"type": "number",
"description": "Optional target Tm (°C). When given, the response includes a pass/fail gate."
},
"tmTolerance": {
"type": "number",
"default": 2,
"description": "Allowed +/- window (°C) around targetTm for the gate."
}
},
"additionalProperties": false
}No endpoints wrapped at confidence ≥ 0.50.
Parent server
com.seqbench/workbench
1/7 registries