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PRSM

protein_hydrophobicity

Active

Tool of com.seqbench/workbench

declared in 1.1.0

Sliding-window hydropathy/hydrophobicity profile (ProtScale-style) over a published amino-acid scale.

Parameters schema

{
  "type": "object",
  "required": [
    "sequence"
  ],
  "properties": {
    "scale": {
      "enum": [
        "Kyte-Doolittle",
        "Hopp-Woods",
        "Eisenberg"
      ],
      "type": "string",
      "default": "Kyte-Doolittle",
      "description": "Amino-acid scale. Kyte-Doolittle and Eisenberg are hydrophobicity; Hopp-Woods is hydrophilicity."
    },
    "window": {
      "type": "integer",
      "default": 9,
      "description": "Sliding-window size (clamped to an odd number ≥ 1)."
    },
    "sequence": {
      "type": "string",
      "description": "Protein sequence (one-letter amino-acid codes; non-AA characters ignored)."
    }
  },
  "additionalProperties": false
}

What this tool wraps· 0 endpoints

min confidence0.700.50

No endpoints wrapped at confidence ≥ 0.50.

Parent server

com.seqbench/workbench

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