sequence

Active

declared in 0.1.0

"DNA / cDNA / CDS / protein sequence of [gene]" / "FASTA for [Ensembl ID]" / "get sequence of [transcript]" — sequence by Ensembl stable ID. Type defaults to "genomic"; pass "cdna", "cds", or "protein" for processed forms. Use for sequence retrieval in primer design, variant analysis, or downstream sequence tools.

Parameters schema

{
  "type": "object",
  "examples": [
    {
      "id": "ENSG00000157764"
    },
    {
      "id": "ENST00000288602",
      "type": "cdna"
    }
  ],
  "required": [
    "id"
  ],
  "properties": {
    "id": {
      "type": "string"
    },
    "type": {
      "type": "string",
      "description": "genomic (default) | cdna | cds | protein"
    }
  }
}

What this tool wraps· 1 endpoint

min confidence0.70 0.50

Data resourceEnsembl Genome Browser
EMBL-EBI · scientific-data
name mention0.85

Parent server

Ensembl

https://github.com/pipeworx-io/mcp-ensembl

1/7 registries

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