seqfile_stats

Active

declared in 1.1.0

Statistics for a FASTA or FASTQ file: count, length distribution, N50, GC content and (FASTQ) mean quality.

Parameters schema

{
  "type": "object",
  "required": [
    "input"
  ],
  "properties": {
    "input": {
      "type": "string",
      "description": "FASTA or FASTQ text (raw sequence is treated as single-record FASTA)."
    },
    "qualityOffset": {
      "enum": [
        33,
        64
      ],
      "type": "integer",
      "default": 33,
      "description": "FASTQ Phred ASCII offset (33 = Sanger/Illumina 1.8+, 64 = Illumina 1.3–1.7)."
    }
  },
  "additionalProperties": false
}

What this tool wraps· 0 endpoints

min confidence0.70 0.50

No endpoints wrapped at confidence ≥ 0.70.

Parent server

com.seqbench/workbench

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