motif_finder
ActiveTool of com.seqbench/workbench
declared in 1.1.0
Find (overlapping) occurrences of an IUPAC motif on either strand, allowing mismatches.
Parameters schema
{
"type": "object",
"required": [
"sequence",
"motif"
],
"properties": {
"motif": {
"type": "string",
"description": "Query motif; IUPAC ambiguity codes (R Y S W K M B D H V N) allowed."
},
"sequence": {
"type": "string",
"description": "Nucleotide sequence (raw or FASTA; IUPAC accepted)."
},
"maxMismatches": {
"type": "integer",
"default": 0,
"description": "Maximum allowed mismatches per match."
},
"searchReverseStrand": {
"type": "boolean",
"default": true,
"description": "Also search the reverse strand."
}
},
"additionalProperties": false
}No endpoints wrapped at confidence ≥ 0.70.
Parent server
com.seqbench/workbench
1/7 registries