uniprot

Active

declared in 0.1.0

Fetch AlphaFold structure prediction metadata (PDB/CIF/PAE download URLs, pLDDT scores) by UniProt accession (e.g. "P00533"); equivalent to `prediction` but takes uniprot_id explicitly.

Parameters schema

{
  "type": "object",
  "examples": [
    {
      "uniprot_id": "P00533"
    },
    {
      "uniprot_id": "Q13547"
    }
  ],
  "required": [
    "uniprot_id"
  ],
  "properties": {
    "uniprot_id": {
      "type": "string"
    }
  }
}

What this tool wraps· 2 endpoints

min confidence0.70 0.50

Data resourceUniProt REST API
UniProt Consortium · science
schema key0.85
Data resourceAlphaFold Protein Structure DB API
EMBL-EBI · science
name mention0.85

Parent server

mcp-alphafold

https://github.com/pipeworx-io/mcp-alphafold

2/7 registries

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