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PRSM

find_orfs

Active

Tool of com.seqbench/workbench

declared in 1.1.0

Find open reading frames (ATG…stop) across all six frames.

Parameters schema

{
  "type": "object",
  "required": [
    "sequence"
  ],
  "properties": {
    "sequence": {
      "type": "string",
      "description": "Nucleotide sequence (raw or FASTA; IUPAC accepted)."
    },
    "minAaLength": {
      "type": "integer",
      "default": 30,
      "description": "Minimum protein length (aa) to report."
    },
    "requireStop": {
      "type": "boolean",
      "default": false,
      "description": "Only report ORFs terminated by a stop codon."
    }
  },
  "additionalProperties": false
}

What this tool wraps· 0 endpoints

min confidence0.700.50

No endpoints wrapped at confidence ≥ 0.50.

Parent server

com.seqbench/workbench

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find_orfs — com.seqbench/workbench — PRSM MCP