search_maps

Active

Tool of Emdb

declared in 0.1.0

Search the EBI Electron Microscopy Data Bank (EMDB) for 3D cryo-EM / electron-tomography density maps by free-text keyword (e.g. "ribosome", "spike protein", "apoptosis"). Returns matching maps with EMDB id, title, resolution (Angstrom), and structure-determination method. Keyless. Complements PDB/AlphaFold (which hold atomic/experimental structures).

Parameters schema

{
  "type": "object",
  "required": [
    "query"
  ],
  "properties": {
    "limit": {
      "type": "number",
      "description": "Max results (default 15, max 50)."
    },
    "query": {
      "type": "string",
      "description": "Free-text search, e.g. \"ribosome\", \"spike protein\"."
    }
  }
}

What this tool wraps· 1 endpoint

min confidence0.70 0.50

Data resourceAlphaFold Protein Structure DB API
EMBL-EBI · science
name mention0.70

Parent server

Emdb

https://github.com/pipeworx-io/mcp-emdb

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