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PRSM

sequence_format_convert

Active

Tool of com.seqbench/workbench

declared in 1.1.0

Convert between FASTA and GenBank (whole sequence, CDS or protein), or export to TSV.

Parameters schema

{
  "type": "object",
  "required": [
    "input"
  ],
  "properties": {
    "to": {
      "enum": [
        "fasta",
        "fasta-cds",
        "fasta-protein",
        "genbank",
        "tsv"
      ],
      "type": "string",
      "default": "fasta",
      "description": "Output format. fasta-cds / fasta-protein extract CDS features (GenBank input only)."
    },
    "from": {
      "enum": [
        "auto",
        "fasta",
        "genbank"
      ],
      "type": "string",
      "default": "auto",
      "description": "Input format; 'auto' sniffs it from the first meaningful line."
    },
    "input": {
      "type": "string",
      "description": "A FASTA or GenBank record to convert."
    }
  },
  "additionalProperties": false
}

What this tool wraps· 0 endpoints

min confidence0.700.50

No endpoints wrapped at confidence ≥ 0.70.

Parent server

com.seqbench/workbench

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sequence_format_convert — com.seqbench/workbench — PRSM MCP