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PRSM

format_sequence

Active

Tool of com.seqbench/workbench

declared in 1.1.0

Clean, case-fold, DNA↔RNA convert, reverse and line-wrap a sequence.

Parameters schema

{
  "type": "object",
  "required": [
    "sequence"
  ],
  "properties": {
    "width": {
      "type": "integer",
      "default": 60,
      "description": "Line-wrap width; 0 = single line."
    },
    "convert": {
      "enum": [
        "none",
        "toRna",
        "toDna"
      ],
      "type": "string",
      "default": "none",
      "description": "DNA→RNA (T→U) or RNA→DNA (U→T)."
    },
    "reverse": {
      "type": "boolean",
      "default": false,
      "description": "Reverse the sequence (no complement)."
    },
    "caseMode": {
      "enum": [
        "keep",
        "upper",
        "lower"
      ],
      "type": "string",
      "default": "keep"
    },
    "sequence": {
      "type": "string",
      "description": "Nucleotide sequence (raw or FASTA; IUPAC accepted)."
    },
    "stripNonLetters": {
      "type": "boolean",
      "default": true,
      "description": "Remove digits, spaces and gaps (keep letters only)."
    }
  },
  "additionalProperties": false
}

What this tool wraps· 0 endpoints

min confidence0.700.50

No endpoints wrapped at confidence ≥ 0.50.

Parent server

com.seqbench/workbench

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format_sequence — com.seqbench/workbench — PRSM MCP