plasmid_deep_annotate
ActiveTool of com.seqbench/workbench
declared in 1.1.0
Annotate a plasmid against pLannotate's open-source feature library — a much larger signature set (GenoLIB parts + Swiss-Prot, cross-referenced against ~195k Addgene-deposited plasmids) than plasmid_annotate's built-in curated list. Requires the optional pLannotate sidecar to be deployed and configured; throws a clear internal_error explaining how to set it up if it isn't.
Parameters schema
{
"type": "object",
"required": [
"sequence"
],
"properties": {
"circular": {
"type": "boolean",
"default": true,
"description": "Treat the sequence as a circular plasmid (vs. linear)."
},
"sequence": {
"type": "string",
"description": "Nucleotide sequence (raw or FASTA; IUPAC accepted)."
}
},
"additionalProperties": false
}No endpoints wrapped at confidence ≥ 0.50.
Parent server
com.seqbench/workbench
1/7 registries