id_map_submit
ActiveTool of com.seqbench/workbench
declared in 1.1.0
Submit up to 1000 ids to UniProt's ID mapping service for a single confirmed-safe hop (e.g. Gene_Name -> UniProtKB-Swiss-Prot, or UniProtKB_AC-ID -> Ensembl/GeneID/RefSeq_Protein/Gene_Name). Returns a jobId immediately — poll it with id_map_poll.
Parameters schema
{
"type": "object",
"required": [
"ids",
"from",
"to"
],
"properties": {
"to": {
"type": "string",
"description": "Target id type. Supported single hops: Gene_Name/Ensembl/GeneID/RefSeq_Protein -> \"UniProtKB-Swiss-Prot\" (the only direct target for these), or \"UniProtKB_AC-ID\" -> Ensembl/GeneID/RefSeq_Protein/Gene_Name. Any other pair is rejected — chain two of these hops instead."
},
"ids": {
"type": "array",
"items": {
"type": "string"
},
"description": "The ids to map, up to 1000 (e.g. gene symbols, UniProt accessions, Ensembl gene IDs, Entrez GeneIDs, or RefSeq protein accessions, depending on \"from\")."
},
"from": {
"type": "string",
"description": "Source id type: \"Gene_Name\", \"Ensembl\", \"GeneID\", \"RefSeq_Protein\", or \"UniProtKB_AC-ID\". UniProt's mapping graph is hub-and-spoke — see the \"to\" note."
},
"taxId": {
"type": "string",
"description": "NCBI taxonomy id to disambiguate a gene symbol (only used when from=\"Gene_Name\"). Defaults to human (9606) if omitted."
}
},
"additionalProperties": false
}Parent server
com.seqbench/workbench
1/7 registries